An imaging workflow for characterizing phenotypical change in large histological mouse model datasets

Kishore Mosaliganti; Tony Pan; Randall Ridgway; Richard Sharp; Lee Cooper; Alex Gulacy; Ashish Sharma; Okan Irfanoglu; Raghu Machiraju; Tahsin Kurc; Alain de Bruin; Pamela Wenzel; Gustavo Leone; Joel Saltz; Kun Huang

doi:10.1016/j.jbi.2008.03.013

An imaging workflow for characterizing phenotypical change in large histological mouse model datasets

Kishore Mosaliganti, Tony Pan, Randall Ridgway, Richard Sharp, Lee Cooper, Alex Gulacy, Ashish Sharma, Okan Irfanoglu, Raghu Machiraju, Tahsin Kurc, Alain de Bruin, Pamela Wenzel, Gustavo Leone, Joel Saltz, Kun Huang

Research output: Contribution to journal › Article › peer-review

Original language	English
Pages (from-to)	863-873
Number of pages	11
Journal	Journal of Biomedical Informatics
Volume	41
Issue number	6
DOIs	https://doi.org/10.1016/j.jbi.2008.03.013
State	Published - Dec 2008
Externally published	Yes

ASJC Scopus Subject Areas

Health Informatics
Computer Science Applications

Keywords

Genetic phenotyping
Histology staining
Image analysis
Image registration
Imaging workflow
Light microscopy
Morphometrics
Mutation
Segmentation
Visualization

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10.1016/j.jbi.2008.03.013

Cite this

Mosaliganti, K., Pan, T., Ridgway, R., Sharp, R., Cooper, L., Gulacy, A., Sharma, A., Irfanoglu, O., Machiraju, R., Kurc, T., Bruin, A. D., Wenzel, P., Leone, G., Saltz, J., & Huang, K. (2008). An imaging workflow for characterizing phenotypical change in large histological mouse model datasets. Journal of Biomedical Informatics, 41(6), 863-873. https://doi.org/10.1016/j.jbi.2008.03.013

Mosaliganti, K, Pan, T, Ridgway, R, Sharp, R, Cooper, L, Gulacy, A, Sharma, A, Irfanoglu, O, Machiraju, R, Kurc, T, Bruin, AD, Wenzel, P, Leone, G, Saltz, J & Huang, K 2008, 'An imaging workflow for characterizing phenotypical change in large histological mouse model datasets', Journal of Biomedical Informatics, vol. 41, no. 6, pp. 863-873. https://doi.org/10.1016/j.jbi.2008.03.013

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title = "An imaging workflow for characterizing phenotypical change in large histological mouse model datasets",

keywords = "Genetic phenotyping, Histology staining, Image analysis, Image registration, Imaging workflow, Light microscopy, Morphometrics, Mutation, Segmentation, Visualization",

author = "Kishore Mosaliganti and Tony Pan and Randall Ridgway and Richard Sharp and Lee Cooper and Alex Gulacy and Ashish Sharma and Okan Irfanoglu and Raghu Machiraju and Tahsin Kurc and Bruin, {Alain de} and Pamela Wenzel and Gustavo Leone and Joel Saltz and Kun Huang",

year = "2008",

month = dec,

doi = "10.1016/j.jbi.2008.03.013",

language = "English",

volume = "41",

pages = "863--873",

journal = "Journal of Biomedical Informatics",

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T1 - An imaging workflow for characterizing phenotypical change in large histological mouse model datasets

AU - Mosaliganti, Kishore

AU - Pan, Tony

AU - Ridgway, Randall

AU - Sharp, Richard

AU - Cooper, Lee

AU - Gulacy, Alex

AU - Sharma, Ashish

AU - Irfanoglu, Okan

AU - Machiraju, Raghu

AU - Kurc, Tahsin

AU - Bruin, Alain de

AU - Wenzel, Pamela

AU - Leone, Gustavo

AU - Saltz, Joel

AU - Huang, Kun

PY - 2008/12

Y1 - 2008/12

KW - Genetic phenotyping

KW - Histology staining

KW - Image analysis

KW - Image registration

KW - Imaging workflow

KW - Light microscopy

KW - Morphometrics

KW - Mutation

KW - Segmentation

KW - Visualization

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U2 - 10.1016/j.jbi.2008.03.013

DO - 10.1016/j.jbi.2008.03.013

M3 - Article

C2 - 18502696

AN - SCOPUS:55749113489

SN - 1532-0464

VL - 41

SP - 863

EP - 873

JO - Journal of Biomedical Informatics

JF - Journal of Biomedical Informatics

IS - 6

ER -

An imaging workflow for characterizing phenotypical change in large histological mouse model datasets

ASJC Scopus Subject Areas

Keywords

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