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About
Starch & Enzyme Evolution
Our research focuses on the enzymes of the synthesis of glycogen in bacteria, and starch in plants, with a particular interest in their molecular evolution. These metabolic pathways are excellent candidates to study evolution of molecular function. They are related and developed early in evolution. In addition, they are regulated and composed by few enzymes. We intend to find how regulation appeared and evolved in this pathway, how catalysis was modified, and how specificity for substrates originated. We use molecular modeling, phylogenetic analysis, protein chemistry, enzyme kinetics, and recombinant DNA technology to address these questions.
Our projects are very important not only for the basic knowledge of the evolution of these pathways, but also for more immediate purposes. Starch is the most abundant energy storage compound used by plants and determines the yield of important crops. A deeper knowledge of the enzymes of this pathway allows the rational manipulation of starch production. There is an increasing interest in this field because of its impact. The fruits of this basic science would serve to attack a critical problem of mankind: malnutrition
Our research focuses on the enzymes of the synthesis of glycogen in bacteria, and starch in plants, with a particular interest in their molecular evolution. These metabolic pathways are excellent candidates to study evolution of molecular function. They are related and developed early in evolution. In addition, they are regulated and composed by few enzymes. We intend to find how regulation appeared and evolved in this pathway, how catalysis was modified, and how specificity for substrates originated. We use molecular modeling, phylogenetic analysis, protein chemistry, enzyme kinetics, and recombinant DNA technology to address these questions.
Our projects are very important not only for the basic knowledge of the evolution of these pathways, but also for more immediate purposes. Starch is the most abundant energy storage compound used by plants and determines the yield of important crops. A deeper knowledge of the enzymes of this pathway allows the rational manipulation of starch production. There is an increasing interest in this field because of its impact. The fruits of this basic science would serve to attack a critical problem of mankind: malnutrition
Related documents
Research Interests
- Enzymology
- Biochemistry
- Starch and glycogen biosynthesis
Disciplines
- Biochemistry
- Plant Biology
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A Critical Inter-Subunit Interaction for the Transmission of the Allosteric Signal in the Agrobacterium Tumefaciens ADP-Glucose Pyrophosphorylase
Patel, H., Martinez-Ramirez, G., Dobrzynski, E., Iglesias, A. A., Liu, D. & Ballicora, M., Aug 8 2023, In: Chemistry: Faculty Publications and Other Works. 32, 9Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Mapping Roles of Active Site Residues in the Acceptor Site of the PA3944 Gcn5-Related N-Acetyltransferase Enzyme
Variot, C., Capule, D., Arolli, X., Baumgartner, J., Reidl, C. T., Houseman, C., Ballicora, M., Becker, D. P. & Kuhn, M. L., Aug 1 2023, In: Chemistry: Faculty Publications and Other Works. 32, 8Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Synthesis and Characterization of the N-succinyl-l,l-diaminopimelic Acid Desuccinylase (DapE) Alternate Substrate Analog N,N-dimethyl-l,l-SDAP
Liveris, Z. J., Kelley, E. H., Simmons, E., Konczak, K., Lutz Jr., M., Ballicora, M., Olsen, K. W. & Becker, D. P., Aug 15 2023, In: Chemistry: Faculty Publications and Other Works. 91Research output: Contribution to journal › Article › peer-review
Open Access -
Carbohydrate Metabolism in Bacteria: Alternative Specificities in ADP-Glucose Pyrophosphorylases Open Novel Metabolic Scenarios and Biotechnological Tools
Bhayani, J. A., Iglesias, M. J., Minen, R. I., Cereijo, A. E., Ballicora, M., Iglesias, A. A. & Asencion Diez, M. D., Apr 27 2022, In: Chemistry: Faculty Publications and Other Works. 13, 867384Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Determination of dissociation constants of protein ligands by thermal shift assay
Bhayani, J. A. & Ballicora, M., Jan 29 2022, In: Chemistry: Faculty Publications and Other Works. 590Research output: Contribution to journal › Article › peer-review
Open AccessFile